1) Is it possible to start R sessions on Linux (e.g. Rsession1) and submit multiple jobs in batch mode to the same R Session (e.g. job1 to Rsession1 and then later on based on user action submit job2 to Rsession1)? This is equivalent to opening interactive R Session and submitting job1 and the user can submit…
Tag: r
x86_64-conda_cos6-linux-gnu-ld: cannot find -lc
I cannot install most of new packages in R, because of the following error: x86_64-conda_cos6-linux-gnu-ld: cannot find -lc. in some cases it is cannot find x86_64-conda_cos6-linux-gnu-ld: cannot find -lm Based on this post, the -l option is for linking dynamic libraries. This post suggests sudo yum install g…
How to install R and RMySQL in RedHat Linux 8?
How do I install R and RMYSQL on RedHat Linux 8? Cannot get the epel working. Trying to install R gives dependency errors. Answer Followed the instructions here: https://linuxconfig.org/install-r-on-linux-redhat-8 (Assuming that you have already installed the MySQL) Untar the downloaded R : Now install the fo…
Error while loading library “libicuuc.so.63” on termux
Since I have made an update of packages on Termux via: R can’t start, I receive this error message: I tried to reinstall the package ‘libicu’ through: but it has not worked: Does anyone have any tips or ideas? Answer I have never used linux, It is uncertain. Have you tried this code? Regardi…
Failing to install R oligo and RCurl packages on Linux CentOS 7
I am trying to install the Bioconductor oligo R package on my laptop where I have Linux CentOS 7. It cannot be installed through the common Bioconductor installation commands because it says that RCurl was installed for anoter Rversion and needs to be reinstalled. I tried to install it through the command: in…
Package fracdiff of R fails to install in Linux Mint
I am installing the package forecast. However, I get a persistent error because the package fracdiff fails with this error: Normally, when I see had non-zero exit status, it is for me a clue telling me that I should go to Synaptic and search for the library r-cran-fracdiff. However, this library is not presen…
port 28060 tcp is related to R?
OS is mint 18.2. subset output of netstat -ltnu is below. sessionInfo() out: R version 3.4.3 (2017-11-30) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Linux Mint 18.2 Matrix products: default BLAS: /usr/lib/libblas/libblas.so.3.6.0 LAPACK: /usr/lib/lapack/liblapack.so.3.6.0 locale: [1] LC_CTYPE=en_CA…
Error installing minqa in a non-standard location in Scientific Linux 6.6
I would ultimately like to install lme4 for R-3.2.5 on a system with Scientific Linux 6.6. I’m on a shared system (I’m compiling R packages for a distributed computing problem), so I need to install all the packages to a non-standard location (/a/lot/of/subdirectories/R-3.2.5 instead of the usual …
Schedule a function that belongs to an R package
I’m trying to build an R package whose goal is to run a series of analyses by taking input data and writing output data to an external database (PostgreSQL). Specifically, I need a set of operations to be scheduled to run on a daily basis. Therefore, I have written some bash scripts with R code (using t…
R: install package tkrplot. Error message: ld: cannont find -lXss
I want to install the tkrplot package for R on my opensuse42 computer using install.packages(“tkrplot”,dep=TRUE) However, I get an error message and i dont know how to proceed. gcc -std=gnu99 -shared -L/usr/lib64/R/lib -L/usr/local/lib64 -o tkrplot.so tcltkimg.o -L/usr/lib64 -ltcl8.6 -L/usr/lib64 …